The detailed information of tRNA gene sequence


Sequence ID>SRA1007333
Genome IDSRR020488.413461
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 259
End posion on genome 174
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagagagtaa
tRNA gene sequence 
GCCGAGGTCGCATAGCCTGGTATTGCGCATGACTGGAAATCATGTGGGTTCTACCCTCGG
GAGTTCAAATCTCCCTCTCGGCGCCA
Downstream region at tRNA end position 
ttaaaactca
Secondary structure (Cloverleaf model)
>SRA1007333	Ser	GGA
                   a      GCCA ttaaaactca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C T C     A
      C G A        C      | | | | |     A
    C       T A C G       G G G A G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TGGGTTCTACCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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