The detailed information of tRNA gene sequence


Sequence ID>SRA1007336
Genome IDSRR020488.415340
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 179
End posion on genome 252
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atcaataact
tRNA gene sequence 
GCCGGGTTAGCTGAGTTGGTTCAAGCGACTGATTCGTAATCAGTAGTAGGTGGGTTCGAT
TCCCATACCCGGGCtct
Downstream region at tRNA end position 
tttatctatt
Secondary structure (Cloverleaf model)
>SRA1007336	Thr	CGT
                   t      Ctct tttatctatt
                     G   G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       G T C G       G T G G G     C
    G         | | |                 T T
    G       A A G C
      T T C        G     AGTAG
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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