The detailed information of tRNA gene sequence


Sequence ID>W1810587128
Genome IDQFFY01000001
Search identical group
Phylum/ClassAcidobacteriota
SpeciesOccallatibacter savannae AB23 [QFFY]
Start position on genome 309206
End posion on genome 309299
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tctcacaaat
tRNA gene sequence 
GGAAGCGCTTGGGATCCGGTGATCCTCCCGGTCTTCAAAACCGGCGGTCGTCCTTAGGGG
CAACGGTGTGTTCGACTCGCACGCGCTTCCGCCA
Downstream region at tRNA end position 
gtccctcaac
Secondary structure (Cloverleaf model)
>W1810587128	Sec	TCA
                   t      GCCA gtccctcaac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T C
                    T     C A C G C     A
      C C T        T      | | | + |     G
    G       A G G G       G T G T G     C
    G       | | | +                 T T
    T       T C C T
      G A          C     CGGTCGTCCTTAGGGGCAACG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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