The detailed information of tRNA gene sequence


Sequence ID>SRA1007409
Genome IDSRR020488.438249
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 105
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgattaaaa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTAATGGGAAACTGTTC
GTGGGTTCGAATCCCACCCTCTCCGgat
Downstream region at tRNA end position 
ttttttagtg
Secondary structure (Cloverleaf model)
>SRA1007409	Ser	CGA
                   a      Ggat ttttttagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATGGGAAACTGTTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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