The detailed information of tRNA gene sequence


Sequence ID>SRA1007420
Genome IDSRR020488.443257
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 157
End posion on genome 72
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GCCGGAGTGGCGGAATTGGTAGACGCGTTCGATTCAAAATCGAGTGCCCAAAAGGCGTGA
GAGTTCGAGTCTCTCCTCCGGCACCA
Downstream region at tRNA end position 
aaggagaaat
Secondary structure (Cloverleaf model)
>SRA1007420	Leu	CAA
                   a      ACCA aaggagaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCCAAAAGGCGT
                    T + G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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