The detailed information of tRNA gene sequence


Sequence ID>SRA1007451
Genome IDSRR020488.456803
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 160
End posion on genome 84
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgaataat
tRNA gene sequence 
GGGATCGTAGTTCAGCTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGGTCCCGCCA
Downstream region at tRNA end position 
aaaataaccc
Secondary structure (Cloverleaf model)
>SRA1007451	Asp	GTC
                   t      GCCA aaaataaccc
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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