The detailed information of tRNA gene sequence


Sequence ID>SRA1007452
Genome IDSRR020488.456857
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 260
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttttaattta
tRNA gene sequence 
GCCTATATAGCTCAGAGGTAGAGCAACTGTCTCGTAAACAGTAGGACATTGGTTCAAATC
CAATTATCGGCAttt
Downstream region at tRNA end position 
caaaaaacaa
Secondary structure (Cloverleaf model)
>SRA1007452	Thr	CGT
                   a      Attt caaaaaacaa
                     G - C
                     C - G
                     C - G
                     T   C
                     A - T
                     T - A
                     A - T          T A
                    T     T A A C C     A
        G A        A      | | | | |     A
      A     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGAC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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