The detailed information of tRNA gene sequence


Sequence ID>SRA1007485
Genome IDSRR020489.26863
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 156
End posion on genome 80
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnnnnnggg
tRNA gene sequence 
GAACCGTTAGGGTAGTCTGGATATCCTTCCGGCCTTCGGAGCCGGAGACGTGGGTTCGAA
TCCTGCACGGTCCGCCA
Downstream region at tRNA end position 
ctaagcacgg
Secondary structure (Cloverleaf model)
>SRA1007485	Arg	TCG
                   g      GCCA ctaagcacgg
                     G - C
                     A   C
                     A - T
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C G T C C     A
    C T G A        A      | + + | |     G
  T         T G G G       G T G G G     C
  G           | | +                 T T
  G         T C C T
    A T A          T     AGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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