The detailed information of tRNA gene sequence


Sequence ID>SRA1007489
Genome IDSRR020489.29199
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 24
End posion on genome 113
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catggcatct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCACTGGTCTTGAAAACCAGCAAGGGTTTACGCCCT
TCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gcttcttagg
Secondary structure (Cloverleaf model)
>SRA1007489	Ser	TGA
                   t      GCCA gcttcttagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTTTACGCCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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