The detailed information of tRNA gene sequence


Sequence ID>SRA1007499
Genome IDSRR020489.39075
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 81
End posion on genome 154
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttactttaaa
tRNA gene sequence 
GGTCCTGTGGCCGAGCGGTTAGGCAGAGCTCTGCAAAAGCTTCTACACCAGTTCGAATCT
GGTCAGGACCTCTA
Downstream region at tRNA end position 
aattatattt
Secondary structure (Cloverleaf model)
>SRA1007499	Cys	GCA
                   a      TCTA aattatattt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G G T C     A
        G A        G      | | | | |     G
      C     G C C G       A C C A G     C
      G       | | |                 T T
      G     A G G C
        T T        A     CTAC
                    G + T
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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