The detailed information of tRNA gene sequence


Sequence ID>SRA1007512
Genome IDSRR020489.46826
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 128
End posion on genome 53
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttttgtggtT
tRNA gene sequence 
GCTCGGTTCGTCTAGTGGTTAGGACCTCTGCTTTACACGCAGGTGATCGGCGGTTCGATC
CCGTCACTGAGTATCt
Downstream region at tRNA end position 
ctgctttttt
Secondary structure (Cloverleaf model)
>SRA1007512	Val	TAC
                   T      ATCt ctgctttttt
                     G + T
                     C - G
                     T - A
                     C - G
                     G + T
                     G - C
                     T - A          C T
                    T     C T G C C     A
      T G A        C      | + | | |     G
    G       T C T G       G G C G G     C
    G       + | | |                 T T
    T       G G A C
      T A          C     TGATC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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