The detailed information of tRNA gene sequence


Sequence ID>SRA1007515
Genome IDSRR020489.48787
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 129
End posion on genome 57
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcttcatgg
tRNA gene sequence 
AGCGGAGTGGCGCAGTGGTTAGCGTGTTGGGCTCATAACTCAAAGGTCGGTGGATCGAAA
CCACTCTCCGCTAtat
Downstream region at tRNA end position 
tgttgccgtt
Secondary structure (Cloverleaf model)
>SRA1007515	Met	CAT
                   g      Atat tgttgccgtt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          A A
                    T     T C A C C     A
      T G A        G      + | | | |     G
    G       C G C G       G G T G G     C
    G       | | | +                 A T
    T       G C G T
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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