The detailed information of tRNA gene sequence


Sequence ID>SRA1007521
Genome IDSRR020489.51734
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 39
End posion on genome 127
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ttcccctaaG
tRNA gene sequence 
GGAGGGGGTTCCAGAGCGGTCAAATGGGGCGGGCTGTAAACCCGTTGACTTCGGTCTTCG
AAAGTTCGAATCTTTCCCCCTCCCACC
Downstream region at tRNA end position 
Attcaatagt
Secondary structure (Cloverleaf model)
>SRA1007521	Tyr	GTA
                   G      CACC Attcaatagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    G     C T T T C     A
    C G A G        T      | | | | |     G
  G         A C C T       G A A A G     C
  G             | +                 T T
  T         A T G G
    C A A          G     TGACTTCGGTCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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