The detailed information of tRNA gene sequence


Sequence ID>SRA1007543
Genome IDSRR020489.78513
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 8
End posion on genome 83
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnncgtatat
tRNA gene sequence 
GACCCCTTCGTCTAGTGGCCTAGGACTCCAGGTTTTCATCCTGGCAACACGGGTTCGAGT
CCCGTAGGGGTCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>SRA1007543	Glu	TTC
                   t      GCCA tttttatttt
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        T     CAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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