The detailed information of tRNA gene sequence


Sequence ID>SRA1007544
Genome IDSRR020489.79154
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 83
End posion on genome 158
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tttatatatg
tRNA gene sequence 
GGGCTTATAGCTCAGCTGGTTAGAGCGCATCTCTGATAAGGATGAGGTCCGTGGTTCGAG
TCCACGTAGGCCCCCAc
Downstream region at tRNA end position 
cccaactttt
Secondary structure (Cloverleaf model)
>SRA1007544	Ile	GAT
                   g      CCAc cccaactttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     A - T          T G
                    T     G C A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK