The detailed information of tRNA gene sequence


Sequence ID>SRA1007545
Genome IDSRR020489.79633
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 138
End posion on genome 63
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actaaattcT
tRNA gene sequence 
GGGACCGTAGTTCAACTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAA
TCCCGTCGGTCCCGTtg
Downstream region at tRNA end position 
atttctaaaa
Secondary structure (Cloverleaf model)
>SRA1007545	Asp	GTC
                   T      GTtg atttctaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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