The detailed information of tRNA gene sequence


Sequence ID>SRA1007561
Genome IDSRR020489.90620
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 44
End posion on genome 119
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgcccgtctc
tRNA gene sequence 
GCTGGCGTAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGTAGGTTCAAAT
CCTATCGCCAGCTCCA
Downstream region at tRNA end position 
tattcggagt
Secondary structure (Cloverleaf model)
>SRA1007561	Thr	TGT
                   c      TCCA tattcggagt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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