The detailed information of tRNA gene sequence


Sequence ID>SRA1007574
Genome IDSRR020489.103416
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 85
End posion on genome 10
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctcagagc
tRNA gene sequence 
GGGCCGGTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTCGGTCGCGGGTTCGATC
CCCGCTCGGCCCACTA
Downstream region at tRNA end position 
tccatttagn
Secondary structure (Cloverleaf model)
>SRA1007574	Met	CAT
                   c      ACTA tccatttagn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          C T
                    T     C G C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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