The detailed information of tRNA gene sequence


Sequence ID>SRA1007580
Genome IDSRR020489.107850
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 41
End posion on genome 114
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatctagtat
tRNA gene sequence 
GGCCACGTGGCGGAATGGTTACGCAGAGGATTGCAAATCCTTTTATCCCAGTTCAATTCT
GGGCGTGGCCTCCA
Downstream region at tRNA end position 
gagataatcg
Secondary structure (Cloverleaf model)
>SRA1007580	Cys	GCA
                   t      TCCA gagataatcg
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     G G G T C     A
        A A        G      | | | | |     A
      T     G G C G       C C C A G     C
      G       | | |                 T T
      G     A C G C
        T T        A     TTAT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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