The detailed information of tRNA gene sequence


Sequence ID>SRA1007589
Genome IDSRR020489.112859
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 110
End posion on genome 36
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gtttcacacc
tRNA gene sequence 
GCTCTCTTAGCGCAGTTGGTTAGCGCGTGGTGCTTATAACACCAAGGTCGTGGGTTCGAG
TCCCACAGGGAGCACtc
Downstream region at tRNA end position 
aatatctctt
Secondary structure (Cloverleaf model)
>SRA1007589	Ile	TAT
                   c      ACtc aatatctctt
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    T - A
                    G - C
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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