The detailed information of tRNA gene sequence


Sequence ID>SRA1007601
Genome IDSRR020489.126340
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 143
End posion on genome 70
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcttcattt
tRNA gene sequence 
GGGCCCATAGCTCAACGGTTAGAGCAGCAGACTCATAATCTGTTGGTTCGGGGTTCGAAT
CCCTGTGGGCCCACac
Downstream region at tRNA end position 
attcctcatg
Secondary structure (Cloverleaf model)
>SRA1007601	Met	CAT
                   t      ACac attcctcatg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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