The detailed information of tRNA gene sequence


Sequence ID>SRA1007602
Genome IDSRR020489.127817
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 58
End posion on genome 143
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttgcctgaat
tRNA gene sequence 
GCTCAAGTGGCGGAATTGGTAGACGCGCTGGATTCAAAATCCAGTTCTTTTTAAGAGTGT
GGGTTCGATTCCCACCTTGAGTACTA
Downstream region at tRNA end position 
aattaaatag
Secondary structure (Cloverleaf model)
>SRA1007602	Leu	CAA
                   t      ACTA aattaaatag
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C          T T
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTTTTAAGAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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