The detailed information of tRNA gene sequence


Sequence ID>SRA1007616
Genome IDSRR020489.137323
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 90
End posion on genome 16
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tgtaattcgg
tRNA gene sequence 
GCTCATATAGCTCAGCGGTAGAGCACTTGCTTGGTAAGTAAGAGGTCACCGGTTCAAGTC
CGGTTATGAGCTCCA
Downstream region at tRNA end position 
ctttataggt
Secondary structure (Cloverleaf model)
>SRA1007616	Thr	GGT
                   g      TCCA ctttataggt
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A
                     A - T          T G
                    T     T G G C C     A
        G A        A      | | | | |     A
      C     C T C G       A C C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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