The detailed information of tRNA gene sequence


Sequence ID>SRA1007626
Genome IDSRR020489.151766
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 165
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatattata
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTAATGCAGCGGATTGCTAATCCGTCAACCTGTAACAGGTTGC
GAGGGTTCGATTCCCTCACCCTCCGCCC
Downstream region at tRNA end position 
ccnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007626	Ser	GCT
                   a      GCCC ccnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C T C C C     A
        G A        G      | | | | |     G
      C     G A C G       G A G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CAACCTGTAACAGGTTGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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