The detailed information of tRNA gene sequence


Sequence ID>SRA1007646
Genome IDSRR020489.170889
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 9
End posion on genome 82
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nngatcggag
tRNA gene sequence 
GGCGCGGTGGCGGAGTGGCTACGCAGCGGCCTGCAAAGCCGTGGACACCGGTTCGATTCC
GGTCCGCGCCTCCA
Downstream region at tRNA end position 
catgttccgg
Secondary structure (Cloverleaf model)
>SRA1007646	Cys	GCA
                   g      TCCA catgttccgg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     GGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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