The detailed information of tRNA gene sequence


Sequence ID>SRA1007679
Genome IDSRR020489.205755
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aattatccaT
tRNA gene sequence 
GCTCCCTTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCNGTGGGCCTCAGGTTCGAA
TCCTGAAGGGAGCGTat
Downstream region at tRNA end position 
acnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1007679	Arg	TCT
                   T      GTat acnnnnnnnn
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     A G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    A - T
                    C - G
                    T   N
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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