The detailed information of tRNA gene sequence


Sequence ID>SRA1007703
Genome IDSRR020490.10051
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 149
End posion on genome 74
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccgagcatt
tRNA gene sequence 
GGCCCCGTCGTCTAGAGGCCTAGGACGCCGCCCTCTCAAGGCGGAAACGCCGGTTCAAAT
CCGGTCGGGGCTGCTA
Downstream region at tRNA end position 
gtgttactaa
Secondary structure (Cloverleaf model)
>SRA1007703	Glu	CTC
                   t      GCTA gtgttactaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      A G A        C      + | | | |     A
    G       T C T G       G C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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