The detailed information of tRNA gene sequence


Sequence ID>SRA1007706
Genome IDSRR020490.12017
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 220
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aataagagga
tRNA gene sequence 
GCACGAGTAGCTCAGTTGGTTAGAGCAGCGGTTTGTGGAACCGAAGGTCGGCAGTTCGAA
TCTGCCCTCGTGTACCA
Downstream region at tRNA end position 
aaaaatgcaa
Secondary structure (Cloverleaf model)
>SRA1007706	His	GTG
                   a      ACCA aaaaatgcaa
                     G + T
                     C - G
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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