The detailed information of tRNA gene sequence


Sequence ID>SRA1007874
Genome IDSRR020490.104329
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 87
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataaaagatg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGAATGATTCGAAATCATTTAATAGGCGACTATTC
GTGGGTTCGAATCCCACCCTCTCCGttt
Downstream region at tRNA end position 
aataatcttc
Secondary structure (Cloverleaf model)
>SRA1007874	Ser	CGA
                   g      Gttt aataatcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAATAGGCGACTATTC
                    A - T
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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