The detailed information of tRNA gene sequence


Sequence ID>SRA1007879
Genome IDSRR020490.106718
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 237
End posion on genome 162
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctaactaaat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCTTCCCTTGCACGGAAGAGGTCGGGAGTTCGATC
CTCCCAGGCTCCACCA
Downstream region at tRNA end position 
aatctaaatt
Secondary structure (Cloverleaf model)
>SRA1007879	Ala	TGC
                   t      ACCA aatctaaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     C C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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