The detailed information of tRNA gene sequence


Sequence ID>SRA1007897
Genome IDSRR020490.114211
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 176
End posion on genome 85
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaataatca
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTTTAAGGCGCGCGCTTGGAAAGCGTGTATTCTGAGAAATTGG
AATCGAGGGTTCGAATCCCTTCCTCTCTGCTA
Downstream region at tRNA end position 
agttgtacaa
Secondary structure (Cloverleaf model)
>SRA1007897	Ser	GGA
                   a      GCTA agttgtacaa
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTCTGAGAAATTGGAATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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