The detailed information of tRNA gene sequence


Sequence ID>SRA1007904
Genome IDSRR020490.115768
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 97
End posion on genome 23
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gccttttttt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTAAGGGAGCAGTCTGCAAAACTGTCATTCACCAGTTCGAATC
TGGTCGACGCCTCAA
Downstream region at tRNA end position 
tgccgaggtg
Secondary structure (Cloverleaf model)
>SRA1007904	Cys	GCA
                   t      TCAA tgccgaggtg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T G G T C     A
        G A        A      | | | | |     G
      T     A C C C       A C C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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