The detailed information of tRNA gene sequence


Sequence ID>SRA1007972
Genome IDSRR020490.145115
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 159
End posion on genome 67
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcactcgttt
tRNA gene sequence 
GGTGAGGTGGGTGAGCTGGTTTAAACCAGAAGTTTGCTAAATTTCCGTAGGTGTAACAAT
CTACCGTGGGTTCGAATCCCACCCTCACCGCCA
Downstream region at tRNA end position 
gattactacc
Secondary structure (Cloverleaf model)
>SRA1007972	Ser	GCT
                   t      GCCA gattactacc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T G G       G T G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTGTAACAATCTACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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