The detailed information of tRNA gene sequence


Sequence ID>SRA1007979
Genome IDSRR020490.148441
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cggcaggggt
tRNA gene sequence 
GCCGTTTTAGCTTAGCTGGTGGAGCGTGGGACTGTTAATCCCAAGGTCATGGGTTCGAAC
CCCATAAACGGCGCCT
Downstream region at tRNA end position 
tttccgtaat
Secondary structure (Cloverleaf model)
>SRA1007979	Asn	GTT
                   t      GCCT tttccgtaat
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     T - A          C A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    T       T T C G       A T G G G     C
    G       + | | |                 T T
    G       G A G C
      T G          G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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