The detailed information of tRNA gene sequence


Sequence ID>SRA1008016
Genome IDSRR020490.165034
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 126
End posion on genome 53
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttaattaaag
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGATAGAGCGACGGTTTCCTAAACCGTAGGCCGTGGGTTCAAG
TCCCGCCAGCCCCGtta
Downstream region at tRNA end position 
cgaaaaacga
Secondary structure (Cloverleaf model)
>SRA1008016	Arg	CCT
                   g      Gtta cgaaaaacga
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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