The detailed information of tRNA gene sequence


Sequence ID>SRA1008039
Genome IDSRR020490.180850
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 173
End posion on genome 259
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gatagaaaag
tRNA gene sequence 
GGGCGAATGGTGGAACTGGTAGACGCGTTGGATTCAAAATCCAATAGTAGCAATACTTTG
AGAGTTCGAGTCTCTCTTCGCCCACCA
Downstream region at tRNA end position 
aaaaatgnnn
Secondary structure (Cloverleaf model)
>SRA1008039	Leu	CAA
                   g      ACCA aaaaatgnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     C T C T C     A
      C A A        G      | | | | |     G
    T       G G T G       G A G A G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TAGTAGCAATACTTT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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