The detailed information of tRNA gene sequence


Sequence ID>SRA1008127
Genome IDSRR020490.216554
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 264
End posion on genome 166
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnattttgc
tRNA gene sequence 
GGGAGCGGATGCGTGCCTGGTGGCTGCCGCGGACTTCAAATCCGTTGTGGTGTAACGAGA
GTTGCGCTGGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
ataattaaag
Secondary structure (Cloverleaf model)
>SRA1008127	SeC	TCA
                   c      GCCA ataattaaag
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C C G        T      | | | | |     G
    T       T G C G       G T G G G     C
    G         + | |                 T T
    G       C T G C
      T G G        C     TGTGGTGTAACGAGAGTTGCGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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