The detailed information of tRNA gene sequence


Sequence ID>SRA1008173
Genome IDSRR020490.234913
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 27
End posion on genome 116
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgcctttg
tRNA gene sequence 
GGACAGTTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAAACCGTC
TCGAGGGTTCGAATCCCTCACTGTCCGCCA
Downstream region at tRNA end position 
ctaattgcaa
Secondary structure (Cloverleaf model)
>SRA1008173	Ser	GGA
                   g      GCCA ctaattgcaa
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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