The detailed information of tRNA gene sequence


Sequence ID>SRA1008240
Genome IDSRR020490.275978
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 194
End posion on genome 268
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aactaaagat
tRNA gene sequence 
GCGCCCTTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGATTC
CCCTAGGGCGTACCA
Downstream region at tRNA end position 
caaannnnnn
Secondary structure (Cloverleaf model)
>SRA1008240	Glu	TTC
                   t      ACCA caaannnnnn
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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