The detailed information of tRNA gene sequence


Sequence ID>W1810676756
Genome IDQKMF01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagimonas varians DSM 23678 [QKMF]
Start position on genome 167407
End posion on genome 167496
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgggtcggc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
tatcatttta
Secondary structure (Cloverleaf model)
>W1810676756	Ser	GGA
                   c      GCCA tatcatttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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