The detailed information of tRNA gene sequence


Sequence ID>SRA1008448
Genome IDSRR020490.362216
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 277
End posion on genome 205
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGCCGTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCAAGT
CCTCCACGGCGCGttc
Downstream region at tRNA end position 
gaaaaccctt
Secondary structure (Cloverleaf model)
>SRA1008448	Trp	CCA
                   n      Gttc gaaaaccctt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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