The detailed information of tRNA gene sequence


Sequence ID>W1810701790
Genome IDQMFB01000053
Search identical group
Phylum/ClassBacillota
SpeciesPaenibacillus contaminans CKOBP-6 [QMFB]
Start position on genome 170
End posion on genome 260
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatgagctt
tRNA gene sequence 
GGAGAGATACCCAAGAGGCTCAAGGGGACCCTCTGCTAAGGGGTTAGACTGCGTAAGTGG
TGCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tctctatctt
Secondary structure (Cloverleaf model)
>W1810701790	Ser	GCT
                   t      GCCA tctctatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T C A        G     TAGACTGCGTAAGTGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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