The detailed information of tRNA gene sequence


Sequence ID>SRA1008882
Genome IDSRR020491.51154
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 136
End posion on genome 61
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcctttgaat
tRNA gene sequence 
GGGCGGCTAGCTCAGTTGGGAGAGCGCGGCGTTCGCAACGCCGAGGTCGAGGGTTCGAGC
CCCTTGCCGTCCACCA
Downstream region at tRNA end position 
ttctgcctta
Secondary structure (Cloverleaf model)
>SRA1008882	Ala	CGC
                   t      ACCA ttctgcctta
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     C - G          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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