The detailed information of tRNA gene sequence


Sequence ID>SRA1008939
Genome IDSRR020491.69058
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 208
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttaatttatt
tRNA gene sequence 
GGGGATATGGTGAAATTGGTAAACACGCTGGTCTCAAAAACCAAGTGCCGCAAGGCTTCC
CGGTTCGATTCCGGGTATCCCTACCA
Downstream region at tRNA end position 
aatcaactca
Secondary structure (Cloverleaf model)
>SRA1008939	Leu	CAA
                   t      ACCA aatcaactca
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     G G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       C C C G G     C
    G         | | |                 T T
    G       A C A C
      T A A        G     GTGCCGCAAGGCTT
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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