The detailed information of tRNA gene sequence


Sequence ID>SRA1008991
Genome IDSRR020491.90434
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 7
End posion on genome 99
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnggcaccT
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAACCGTCGTACGGGCATATACC
TGTACCGCGGGTTCGAATCCCGCCCTCTCCGTta
Downstream region at tRNA end position 
gttttttgaa
Secondary structure (Cloverleaf model)
>SRA1008991	Ser	GCT
                   T      GTta gttttttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACGGGCATATACCTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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