The detailed information of tRNA gene sequence


Sequence ID>SRA1009141
Genome IDSRR020491.129880
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 196
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccctttct
tRNA gene sequence 
GGGCCCATAGCTCAACGGTTAGAGCACCGCACTCATAATGCGTAGGTTCGGGGTTCGAAT
CCCTGTGGGCCCACtt
Downstream region at tRNA end position 
ttatttgtaa
Secondary structure (Cloverleaf model)
>SRA1009141	Met	CAT
                   t      ACtt ttatttgtaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTT
                    C   T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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