The detailed information of tRNA gene sequence


Sequence ID>SRA1009258
Genome IDSRR020491.167752
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 143
End posion on genome 70
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcgctccat
tRNA gene sequence 
AGGTCACTAGTTTAATGGTAGAATAGGAGACTCCAAATCTCTTGGTCAGGGTTCGATTCC
TTGGTGACCTGCCA
Downstream region at tRNA end position 
acaacggcgt
Secondary structure (Cloverleaf model)
>SRA1009258	Trp	CCA
                   t      GCCA acaacggcgt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     C - G          T T
                    T     G T T C C     A
        A A        A      | | + | |     G
      T     T T T G       C A G G G     C
      G     + | | +                 T T
      G     G A A T
        T A        A     TGGT
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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