The detailed information of tRNA gene sequence


Sequence ID>SRA1009270
Genome IDSRR020491.172354
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 76
End posion on genome 3
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aaaaatttat
tRNA gene sequence 
GGCTCTGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTTGTGTCGGTGGTTCAATT
CCGCCCGGAGCCACat
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1009270	Phe	GAA
                   t      ACat nnnnnnnnnn
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     A
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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