The detailed information of tRNA gene sequence


Sequence ID>SRA1009448
Genome IDSRR020491.232830
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 49
End posion on genome 125
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attattcaga
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGAGTTCAAA
TCTCTCCACCCCGACCA
Downstream region at tRNA end position 
tacaccgaac
Secondary structure (Cloverleaf model)
>SRA1009448	Pro	TGG
                   a      ACCA tacaccgaac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     A
    C       C G C G       G G G A G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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