The detailed information of tRNA gene sequence


Sequence ID>SRA1009451
Genome IDSRR020491.235315
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 180
End posion on genome 107
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gccgccgatc
tRNA gene sequence 
CGGGATNTGGCGCAGTCAGGCAGCGCACCTGCTTTGGGAGCAGGGGTCGGCGGTTCAAAT
CCGCCCATCCCGACat
Downstream region at tRNA end position 
ggcattcgtt
Secondary structure (Cloverleaf model)
>SRA1009451	Pro	TGG
                   c      ACat ggcattcgtt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     N   C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     A
    C       C G C G       G G C G G     C
    A       | | | |                 T T
    G       G C G C
      G C A        A     GGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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